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Species belonging to selected taxon:
Citrus sinensis
ABOUT THIS RECORD
ID:
MNEST045323
species:
Citrus sinensis
source:
microPC, original name:
miR172
Taxonomy by NCBI:
Citrus sinensis
Citrus
Rutaceae
Sapindales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GAATCTTGATGATGCTGCA
miRNA*
CAGCGTCCTCAAGATTCAC
mismatches:
2
bulges:
0
View larger
pre-miRNA
G
CAGCGTCCTCAAGATTCAC
ATCCAGTCTAAAGGCAAAAGCAGCAATTTTTCTTCATTTTTGCTTGCCTTGGTTTTTGTCAGTGA
GAATCTTGATGATGC
TGCA
dot-bracket secondary structure
(
(((((((.(((((((((.(
((.(((....((((((..(((((.(((........))).))))))))))).....)))...))).
))))))))).)))))
))).
SIMILARITIES
miRBase
csi-MIR172a
:
2e-54
PMRD
sly-miR172b
:
0.000001
microPC
miR172
:
2e-54
UniProt
no hits
RFAM
mir-172: 0.00002
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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